Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | EYY08_14710 | Not Available | Negative | 2862519 - 2862634 | 3848.9 |
| is66 family insertion sequence element accessory protein tnpb | EYY08_15050 | Not Available | Negative | 2901907 - 2902254 | 12753.8 |
| is66 family insertion sequence hypothetical protein | EYY08_15055 | Not Available | Negative | 2902251 - 2902631 | 14056.0 |
| duf4198 domain-containing protein | EYY08_15065 | Not Available | Negative | 2903211 - 2904002 | 29401.8 |
| tonb-dependent receptor | EYY08_15070 | Not Available | Negative | 2904021 - 2905991 | 72171.0 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | EYY08_15090 | Not Available | Positive | 2908335 - 2909651 | 48473.3 |
| glycerophosphodiester phosphodiesterase | EYY08_15100 | Not Available | Positive | 2911146 - 2912489 | 49215.2 |
| murr/rpir family transcriptional regulator | EYY08_15105 | Not Available | Negative | 2912646 - 2913470 | 29547.8 |
| pts glucose transporter subunit iib | EYY08_15110 | Not Available | Positive | 2913636 - 2915192 | 55633.6 |
| n-acetylmannosamine-6-phosphate 2-epimerase | EYY08_15115 | Not Available | Positive | 2915192 - 2915881 | 24334.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





