Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gsph | EYY08_14660 | Not Available | Positive | 2853833 - 2854342 | 18565.1 |
| type ii secretion system protein gspi | EYY08_14665 | Not Available | Positive | 2854300 - 2854716 | 15431.1 |
| type ii secretion system protein gspj | EYY08_14670 | Not Available | Positive | 2854709 - 2855296 | 22255.5 |
| general secretion pathway protein gspk | EYY08_14675 | Not Available | Positive | 2855289 - 2856272 | 37520.5 |
| type ii secretion system protein gspl | EYY08_14680 | Not Available | Positive | 2856287 - 2857450 | 44456.1 |
| type ii secretion system protein m | EYY08_14685 | Not Available | Positive | 2857447 - 2857908 | 17188.8 |
| prepilin peptidase | EYY08_14690 | Not Available | Positive | 2857908 - 2858585 | 24814.1 |
| bacterioferritin | EYY08_14695 | Not Available | Negative | 2858614 - 2859090 | 18526.2 |
| bacterioferritin-associated ferredoxin | EYY08_14700 | Not Available | Negative | 2859162 - 2859356 | 7363.04 |
| bifunctional chitinase/lysozyme | EYY08_14705 | Not Available | Negative | 2859525 - 2862227 | 97374.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





