Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium transporter trka | EYY08_14460 | Not Available | Positive | 2828883 - 2830259 | 50370.8 |
| large-conductance mechanosensitive channel protein mscl | EYY08_14465 | Not Available | Positive | 2830389 - 2830799 | 14987.7 |
| ribosome alternative rescue factor arfa | EYY08_14470 | Not Available | Negative | 2830796 - 2831014 | 8199.88 |
| zn(2+)-responsive transcriptional regulator | EYY08_14475 | Not Available | Negative | 2831070 - 2831495 | 16194.4 |
| duf1992 domain-containing protein | EYY08_14480 | Not Available | Negative | 2831506 - 2831874 | 13928.6 |
| 50s ribosomal protein l17 | EYY08_14485 | Not Available | Negative | 2831981 - 2832364 | 14365.4 |
| dna-directed rna polymerase subunit alpha | EYY08_14490 | Not Available | Negative | 2832405 - 2833394 | 36513.9 |
| 30s ribosomal protein s4 | EYY08_14495 | Not Available | Negative | 2833420 - 2834040 | 23470.5 |
| 30s ribosomal protein s11 | EYY08_14500 | Not Available | Negative | 2834074 - 2834463 | 13845.7 |
| 30s ribosomal protein s13 | EYY08_14505 | Not Available | Negative | 2834480 - 2834836 | 13100.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





