Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | EYY08_14410 | Not Available | Positive | 2821601 - 2822155 | 20276.3 |
| duf1488 domain-containing protein | EYY08_14415 | Not Available | Negative | 2822131 - 2822388 | 10007.5 |
| shikimate dehydrogenase | EYY08_14420 | Not Available | Negative | 2822385 - 2823203 | 29380.4 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | EYY08_14425 | Not Available | Negative | 2823208 - 2823780 | 20641.7 |
| hypothetical protein | EYY08_14430 | Not Available | Negative | 2823785 - 2824327 | 19845.9 |
| duf494 domain-containing protein | EYY08_14435 | Not Available | Negative | 2824356 - 2824829 | 18484.2 |
| dna-protecting protein dpra | EYY08_14440 | Not Available | Negative | 2824801 - 2825925 | 40985.2 |
| peptide deformylase | EYY08_14445 | Not Available | Positive | 2826055 - 2826564 | 19343.6 |
| methionyl-trna formyltransferase | EYY08_14450 | Not Available | Positive | 2826579 - 2827526 | 34214.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | EYY08_14455 | Not Available | Positive | 2827572 - 2828861 | 48281.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





