Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein stpa | EYY08_14205 | Not Available | Positive | 2785023 - 2785427 | 15359.5 |
| thiosulfate sulfurtransferase ygap | EYY08_14210 | Not Available | Negative | 2785474 - 2785998 | 18690.0 |
| transcriptional regulator | EYY08_14215 | Not Available | Negative | 2786008 - 2786307 | 10596.9 |
| yqae/pmp3 family membrane protein | EYY08_14220 | Not Available | Positive | 2786490 - 2786648 | 5865.57 |
| potassium binding protein kbp | EYY08_14225 | Not Available | Positive | 2786732 - 2787181 | 16064.0 |
| dna-binding transcriptional regulator csir | EYY08_14230 | Not Available | Negative | 2787182 - 2787844 | 25078.4 |
| gaba permease | EYY08_14235 | Not Available | Negative | 2787865 - 2789265 | 51115.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | EYY08_14240 | Not Available | Negative | 2789503 - 2790783 | 45730.3 |
| nadp-dependent succinate-semialdehyde dehydrogenase | EYY08_14245 | Not Available | Negative | 2790797 - 2792245 | 51743.0 |
| l-2-hydroxyglutarate oxidase | EYY08_14250 | Not Available | Negative | 2792268 - 2793536 | 46083.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





