Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/l-proline abc transporter substrate-binding protein prox | EYY08_14155 | Not Available | Negative | 2775394 - 2776386 | 35952.3 |
| glycine betaine/l-proline abc transporter permease prow | EYY08_14160 | Not Available | Negative | 2776444 - 2777508 | 37562.0 |
| glycine betaine/l-proline abc transporter atp-binding protein prov | EYY08_14165 | Not Available | Negative | 2777501 - 2778703 | 44135.5 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | EYY08_14170 | Not Available | Negative | 2779059 - 2780018 | 36451.0 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | EYY08_14175 | Not Available | Negative | 2780028 - 2782172 | 80482.5 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | EYY08_14180 | Not Available | Negative | 2782145 - 2782555 | 15341.3 |
| glutaredoxin-like protein nrdh | EYY08_14185 | Not Available | Negative | 2782552 - 2782797 | 9139.98 |
| duf883 domain-containing protein | EYY08_14190 | Not Available | Negative | 2783045 - 2783374 | 11847.9 |
| duf2002 family protein | EYY08_14195 | Not Available | Positive | 2783526 - 2783870 | 13066.5 |
| l-alanine exporter alae | EYY08_14200 | Not Available | Negative | 2783907 - 2784356 | 16968.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





