Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-1-phosphate/6-phosphogluconate phosphatase | EYY08_14105 | Not Available | Positive | 2766008 - 2766574 | 20800.1 |
| deda family protein | EYY08_14110 | Not Available | Positive | 2766571 - 2766999 | 15590.6 |
| glutamate--cysteine ligase | EYY08_14115 | Not Available | Positive | 2767072 - 2768628 | 58272.5 |
| s-ribosylhomocysteine lyase | EYY08_14120 | Not Available | Positive | 2768778 - 2769293 | 19444.4 |
| multidrug efflux mfs transporter permease subunit emrb | EYY08_14125 | Not Available | Negative | 2769357 - 2770895 | 55627.7 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | EYY08_14130 | Not Available | Negative | 2770912 - 2772084 | 42738.6 |
| multidrug efflux transporter emrab transcriptional repressor emrr | EYY08_14135 | Not Available | Negative | 2772211 - 2772741 | 20564.7 |
| l-valine transporter subunit ygah | EYY08_14140 | Not Available | Negative | 2772832 - 2773167 | 12040.3 |
| branched-chain amino acid abc transporter permease | EYY08_14145 | Not Available | Negative | 2773157 - 2773894 | 26095.1 |
| mfs transporter | EYY08_14150 | Not Available | Negative | 2774018 - 2775202 | 41734.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





