Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EYY08_13645 | Not Available | Positive | 2679896 - 2680681 | 28132.7 |
| fad-binding oxidoreductase | EYY08_13650 | Not Available | Positive | 2680751 - 2682205 | 53721.5 |
| mfs transporter | EYY08_13655 | Not Available | Positive | 2682299 - 2683636 | 48137.9 |
| electron transfer flavoprotein subunit beta/fixa family protein | EYY08_13660 | Not Available | Positive | 2683614 - 2684393 | 28643.8 |
| electron transfer flavoprotein subunit alpha/fixb family protein | EYY08_13665 | Not Available | Positive | 2684390 - 2685250 | 30395.5 |
| glycerol-3-phosphate responsive antiterminator | EYY08_13670 | Not Available | Negative | 2685397 - 2685972 | 20801.6 |
| ferredoxin family protein | EYY08_13675 | Not Available | Negative | 2685989 - 2686249 | 9646.53 |
| fad-dependent oxidoreductase | EYY08_13680 | Not Available | Negative | 2686240 - 2687511 | 46261.7 |
| 6-carboxytetrahydropterin synthase qued | EYY08_13685 | Not Available | Negative | 2687589 - 2687954 | 13787.7 |
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | EYY08_13690 | Not Available | Positive | 2688270 - 2690069 | 66302.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





