Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | EYY08_13590 | Not Available | Positive | 2661298 - 2662638 | 49151.0 |
| two-component sensor histidine kinase bara | EYY08_13595 | Not Available | Negative | 2662869 - 2665625 | 102460.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EYY08_13600 | Not Available | Positive | 2665682 - 2666983 | 48049.1 |
| gtp pyrophosphokinase | EYY08_13605 | Not Available | Positive | 2667031 - 2669265 | 83880.4 |
| nucleoside triphosphate pyrophosphohydrolase | EYY08_13610 | Not Available | Positive | 2669361 - 2670152 | 30339.9 |
| ctp synthase (glutamine hydrolyzing) | EYY08_13615 | Not Available | Positive | 2670380 - 2672017 | 60377.7 |
| phosphopyruvate hydratase | EYY08_13620 | Not Available | Positive | 2672104 - 2673402 | 45657.6 |
| 7-carboxy-7-deazaguanine synthase quee | EYY08_13630 | Not Available | Positive | 2674630 - 2675301 | 25031.0 |
| sugar kinase | EYY08_13635 | Not Available | Negative | 2676795 - 2678273 | 54280.1 |
| mfs transporter | EYY08_13640 | Not Available | Negative | 2678300 - 2679577 | 46843.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





