Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | EYY08_13540 | Not Available | Negative | 2649741 - 2651108 | 48751.9 |
| haaap family serine/threonine permease | EYY08_13545 | Not Available | Negative | 2651166 - 2652455 | 46923.3 |
| nucleotide 5'-monophosphate nucleosidase | EYY08_13550 | Not Available | Negative | 2653011 - 2654375 | 50975.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | EYY08_13555 | Not Available | Negative | 2654487 - 2655335 | 32531.1 |
| secy-interacting protein | EYY08_13560 | Not Available | Positive | 2655403 - 2655948 | 20709.6 |
| yqcc family protein | EYY08_13565 | Not Available | Positive | 2656570 - 2656899 | 12772.2 |
| trna pseudouridine(65) synthase truc | EYY08_13570 | Not Available | Positive | 2656899 - 2657681 | 29652.5 |
| flavodoxin | EYY08_13575 | Not Available | Positive | 2657699 - 2658148 | 16298.1 |
| mfs transporter | EYY08_13580 | Not Available | Positive | 2658583 - 2659935 | 49145.0 |
| glucarate dehydratase | EYY08_13585 | Not Available | Positive | 2659937 - 2661277 | 48899.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





