Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | EYY08_13110 | Not Available | Negative | 2547029 - 2547961 | 33072.9 |
| dihydropyrimidinase | EYY08_13115 | Not Available | Negative | 2548009 - 2549394 | 51019.1 |
| ygey family selenium metabolism-linked hydrolase | EYY08_13120 | Not Available | Negative | 2549447 - 2550658 | 44806.4 |
| diaminopropionate ammonia-lyase | EYY08_13125 | Not Available | Negative | 2550716 - 2551912 | 43344.1 |
| knotted carbamoyltransferase ygew | EYY08_13130 | Not Available | Negative | 2551970 - 2553157 | 44057.7 |
| sigma-54-dependent transcriptional regulator | EYY08_13135 | Not Available | Positive | 2553638 - 2555416 | 66085.0 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | EYY08_13140 | Not Available | Negative | 2555456 - 2555935 | 16904.7 |
| xanthine dehydrogenase fad-binding subunit xdhb | EYY08_13145 | Not Available | Negative | 2555932 - 2556810 | 31530.5 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | EYY08_13150 | Not Available | Negative | 2556821 - 2559118 | 82603.9 |
| lysm peptidoglycan-binding domain-containing protein | EYY08_13155 | Not Available | Positive | 2559532 - 2560284 | 26452.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





