Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ncs2 family permease | EYY08_13060 | Not Available | Negative | 2531113 - 2532480 | 46761.0 |
| guanine deaminase | EYY08_13065 | Not Available | Negative | 2532516 - 2533832 | 50102.8 |
| xanthine/proton symporter xanq | EYY08_13070 | Not Available | Negative | 2533850 - 2535250 | 49111.5 |
| molybdopterin-dependent oxidoreductase mo/fe-s-binding subunit | EYY08_13075 | Not Available | Negative | 2535415 - 2538285 | 103682.0 |
| molybdopterin-dependent oxidoreductase fad-binding subunit | EYY08_13080 | Not Available | Negative | 2538282 - 2539061 | 28624.2 |
| putative aminohydrolase ssna | EYY08_13085 | Not Available | Negative | 2539112 - 2540440 | 48770.2 |
| putative selenate reductase subunit ygfk | EYY08_13090 | Not Available | Negative | 2540443 - 2543541 | 115661.0 |
| molybdenum cofactor cytidylyltransferase | EYY08_13095 | Not Available | Negative | 2543863 - 2544441 | 21527.2 |
| putative selenium-dependent hydroxylase accessory protein yqec | EYY08_13100 | Not Available | Positive | 2544545 - 2545315 | 28193.2 |
| ef2563 family selenium-dependent molybdenum hydroxylase system protein | EYY08_13105 | Not Available | Positive | 2545363 - 2546988 | 57697.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





