Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase rpia | EYY08_12905 | Not Available | Positive | 2501290 - 2501949 | 22861.8 |
| d-3-phosphoglycerate dehydrogenase | EYY08_12910 | Not Available | Positive | 2502205 - 2503437 | 44178.4 |
| type i toxin-antitoxin system toxin ibsc | EYY08_12915 | Not Available | Positive | 2503666 - 2503725 | 2219.08 |
| 5-formyltetrahydrofolate cyclo-ligase | EYY08_12920 | Not Available | Negative | 2503826 - 2504428 | 23257.5 |
| cell division protein zapa | EYY08_12930 | Not Available | Negative | 2504674 - 2505003 | 12594.9 |
| upf0149 family protein ygfb | EYY08_12935 | Not Available | Positive | 2505171 - 2505749 | 21230.8 |
| xaa-pro aminopeptidase | EYY08_12940 | Not Available | Positive | 2505775 - 2507100 | 49833.2 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | EYY08_12945 | Not Available | Positive | 2507097 - 2508275 | 42346.0 |
| fad-dependent 2-octaprenylphenol hydroxylase | EYY08_12950 | Not Available | Positive | 2508298 - 2509500 | 44205.2 |
| hypothetical protein | EYY08_12955 | Not Available | Negative | 2509574 - 2509657 | 3271.99 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





