Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small-conductance mechanosensitive channel mscs | EYY08_12855 | Not Available | Positive | 2490853 - 2491713 | 30898.9 |
| arginine exporter argo | EYY08_12860 | Not Available | Positive | 2491852 - 2492487 | 23169.1 |
| oxidative stress defense protein | EYY08_12865 | Not Available | Positive | 2492580 - 2493320 | 26636.7 |
| lysr family transcriptional regulator | EYY08_12870 | Not Available | Positive | 2493488 - 2494384 | 34675.7 |
| propionyl-coa:succinate coa transferase | EYY08_12875 | Not Available | Negative | 2494381 - 2495859 | 53871.6 |
| methylmalonyl-coa decarboxylase | EYY08_12880 | Not Available | Negative | 2495883 - 2496668 | 29260.4 |
| methylmalonyl co-a mutase-associated gtpase meab | EYY08_12885 | Not Available | Negative | 2496679 - 2497674 | 36688.2 |
| methylmalonyl-coa mutase | EYY08_12890 | Not Available | Negative | 2497667 - 2499811 | 77851.8 |
| lysr family transcriptional regulator argp | EYY08_12895 | Not Available | Negative | 2500015 - 2500908 | 33473.6 |
| hypothetical protein | EYY08_12900 | Not Available | Positive | 2501049 - 2501234 | 6746.48 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





