Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sprt family zinc-dependent metalloprotease | EYY08_12755 | Not Available | Negative | 2468785 - 2469282 | 19322.6 |
| sugar porter family mfs transporter | EYY08_12760 | Not Available | Negative | 2469359 - 2470753 | 50966.6 |
| methionine adenosyltransferase | EYY08_12765 | Not Available | Negative | 2471190 - 2472344 | 41954.0 |
| acid stress response protein yqgb | EYY08_12770 | Not Available | Positive | 2472999 - 2473130 | 4859.08 |
| biosynthetic arginine decarboxylase | EYY08_12775 | Not Available | Positive | 2473139 - 2475115 | 73890.6 |
| hypothetical protein | EYY08_12780 | Not Available | Positive | 2475261 - 2475992 | 26159.5 |
| agmatinase | EYY08_12785 | Not Available | Positive | 2476128 - 2477048 | 33558.9 |
| metalloprotease loip | EYY08_12790 | Not Available | Negative | 2477139 - 2477897 | 26874.9 |
| transketolase | EYY08_12795 | Not Available | Positive | 2478175 - 2480166 | 72099.6 |
| prohibitin family protein | EYY08_12800 | Not Available | Negative | 2480212 - 2481120 | 33096.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





