Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xtp/ditp diphosphatase | EYY08_12705 | Not Available | Negative | 2461773 - 2462366 | 20979.9 |
| yggu family protein | EYY08_12710 | Not Available | Negative | 2462374 - 2462664 | 10443.8 |
| osmotic shock tolerance protein yggt | EYY08_12715 | Not Available | Negative | 2462661 - 2463227 | 21168.5 |
| pyridoxal phosphate homeostasis protein | EYY08_12720 | Not Available | Negative | 2463245 - 2463949 | 25788.9 |
| type iv pilus twitching motility protein pilt | EYY08_12725 | Not Available | Positive | 2463967 - 2464947 | 35989.4 |
| holliday junction resolvase ruvx | EYY08_12730 | Not Available | Negative | 2465121 - 2465537 | 15187.2 |
| yqge/algh family protein | EYY08_12735 | Not Available | Negative | 2465537 - 2466100 | 20628.1 |
| glutathione synthase | EYY08_12740 | Not Available | Negative | 2466209 - 2467159 | 35502.8 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | EYY08_12745 | Not Available | Negative | 2467172 - 2467903 | 26979.7 |
| deoxyribonuclease i | EYY08_12750 | Not Available | Negative | 2467983 - 2468690 | 26739.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





