Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prop effector | EYY08_12210 | Not Available | Positive | 2374302 - 2374646 | 13243.1 |
| hypothetical protein | EYY08_12215 | Not Available | Negative | 2374665 - 2375213 | 20417.5 |
| alpa family transcriptional regulator | EYY08_12220 | Not Available | Negative | 2375456 - 2375692 | 9101.93 |
| hypothetical protein | EYY08_12225 | Not Available | Negative | 2375761 - 2376336 | 21808.0 |
| inovirus gp2 family protein | EYY08_12230 | Not Available | Negative | 2376620 - 2377186 | 22483.8 |
| is481 family transposase | EYY08_12235 | Not Available | Positive | 2378282 - 2379253 | 38067.7 |
| restriction endonuclease | EYY08_12240 | Not Available | Negative | 2379610 - 2382243 | 99533.1 |
| hypothetical protein | EYY08_12250 | Not Available | Negative | 2383859 - 2385394 | 58854.4 |
| hypothetical protein | EYY08_12255 | Not Available | Positive | 2386261 - 2386743 | 18161.4 |
| inovirus gp2 family protein | EYY08_12260 | Not Available | Negative | 2387264 - 2387995 | 27810.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





