Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY08_12145 | Not Available | Positive | 2364315 - 2364512 | 7146.77 |
| hypothetical protein | EYY08_12155 | Not Available | Negative | 2365456 - 2365719 | 9712.4 |
| killer suppression protein higa | EYY08_12160 | Not Available | Positive | 2365863 - 2366189 | 12137.7 |
| imma/irre family metallo-endopeptidase | EYY08_12165 | Not Available | Positive | 2366186 - 2367268 | 41516.1 |
| hypothetical protein | EYY08_12170 | Not Available | Negative | 2367271 - 2368215 | 35623.1 |
| thymidylate synthase | EYY08_12175 | Not Available | Negative | 2368212 - 2369192 | 37507.5 |
| dntp triphosphohydrolase | EYY08_12185 | Not Available | Positive | 2370672 - 2371904 | 47286.3 |
| hypothetical protein | EYY08_12190 | Not Available | Positive | 2372005 - 2372574 | 21986.5 |
| h-ns histone family protein | EYY08_12195 | Not Available | Negative | 2372990 - 2373424 | 16524.4 |
| osmoprotectant transport activator proq | EYY08_12205 | Not Available | Positive | 2374132 - 2374305 | 6348.83 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





