Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-sorbose 1-phosphate reductase | EYY08_12025 | Not Available | Positive | 2331552 - 2332781 | 44701.2 |
| dipeptidase pepe | EYY08_12030 | Not Available | Positive | 2333164 - 2333853 | 24571.7 |
| na/pi cotransporter family protein | EYY08_12035 | Not Available | Negative | 2333943 - 2335574 | 59470.7 |
| methionine synthase | EYY08_12040 | Not Available | Negative | 2335794 - 2339477 | 136070.0 |
| glyoxylate bypass operon transcriptional repressor iclr | EYY08_12045 | Not Available | Positive | 2339677 - 2340501 | 29722.1 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | EYY08_12050 | Not Available | Negative | 2340518 - 2342242 | 67181.8 |
| isocitrate lyase | EYY08_12055 | Not Available | Negative | 2342458 - 2343762 | 47524.1 |
| malate synthase a | EYY08_12060 | Not Available | Negative | 2343792 - 2345393 | 60304.9 |
| homoserine o-succinyltransferase | EYY08_12065 | Not Available | Negative | 2345662 - 2346591 | 35729.2 |
| acetyltransferase | EYY08_12070 | Not Available | Positive | 2346748 - 2347191 | 16620.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





