Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | EYY08_11970 | Not Available | Negative | 2321798 - 2323447 | 61533.1 |
| lysine-sensitive aspartokinase 3 | EYY08_11980 | Not Available | Positive | 2323972 - 2325321 | 48638.7 |
| duf3811 domain-containing protein | EYY08_11985 | Not Available | Positive | 2325575 - 2325847 | 10488.6 |
| 23s rrna pseudouridine(2604) synthase rluf | EYY08_11990 | Not Available | Negative | 2325848 - 2326720 | 32436.4 |
| sugar-binding transcriptional regulator | EYY08_11995 | Not Available | Positive | 2327068 - 2328015 | 34978.9 |
| sdr family oxidoreductase | EYY08_12000 | Not Available | Positive | 2328085 - 2328891 | 29025.7 |
| pts sorbose transporter subunit iia | EYY08_12005 | Not Available | Positive | 2328901 - 2329308 | 14820.0 |
| pts system mannose/fructose/n-acetylgalactosamine-transporter subunit iib | EYY08_12010 | Not Available | Positive | 2329308 - 2329802 | 18444.2 |
| pts mannose/fructose/sorbose transporter subunit iic | EYY08_12015 | Not Available | Positive | 2329868 - 2330665 | 28032.2 |
| pts system mannose/fructose/sorbose family transporter subunit iid | EYY08_12020 | Not Available | Positive | 2330676 - 2331500 | 29499.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





