Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4065 domain-containing protein | EYY08_11860 | Not Available | Negative | 2299897 - 2300469 | 21974.5 |
| zinc uptake transcriptional repressor zur | EYY08_11865 | Not Available | Positive | 2300941 - 2301456 | 19308.3 |
| csbd family protein | EYY08_11870 | Not Available | Negative | 2301498 - 2301707 | 8349.69 |
| mate family efflux transporter dinf | EYY08_11875 | Not Available | Negative | 2301823 - 2303148 | 47754.0 |
| repressor lexa | EYY08_11880 | Not Available | Negative | 2303221 - 2303829 | 22359.1 |
| diacylglycerol kinase | EYY08_11885 | Not Available | Negative | 2303939 - 2304307 | 13245.4 |
| glycerol-3-phosphate 1-o-acyltransferase | EYY08_11890 | Not Available | Positive | 2304478 - 2306901 | 91386.9 |
| 4-hydroxybenzoate octaprenyltransferase | EYY08_11895 | Not Available | Negative | 2307056 - 2307928 | 32513.6 |
| chorismate--pyruvate lyase | EYY08_11900 | Not Available | Negative | 2307941 - 2308438 | 18809.0 |
| maltose operon protein malm | EYY08_11905 | Not Available | Negative | 2308617 - 2309537 | 31933.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





