Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase hrpa | EYY08_11490 | Not Available | Negative | 2235189 - 2239091 | 148982.0 |
| fmn-dependent nadh-azoreductase | EYY08_11495 | Not Available | Positive | 2239292 - 2239897 | 21659.9 |
| phosphatase pap2/dual specificity phosphatase family protein | EYY08_11500 | Not Available | Negative | 2239951 - 2241267 | 50550.7 |
| alpha/beta fold hydrolase | EYY08_11505 | Not Available | Negative | 2241257 - 2243014 | 65422.2 |
| hypothetical protein | EYY08_11510 | Not Available | Negative | 2243030 - 2243926 | 33359.2 |
| cdp-alcohol phosphatidyltransferase family protein | EYY08_11515 | Not Available | Negative | 2243926 - 2244531 | 22643.6 |
| hypothetical protein | EYY08_11840 | Not Available | Positive | 2297521 - 2298330 | 29972.4 |
| 3'-5' exoribonuclease | EYY08_11845 | Not Available | Positive | 2298330 - 2298902 | 21162.0 |
| pyocin activator protein prtn | EYY08_11850 | Not Available | Positive | 2298939 - 2299220 | 10727.9 |
| hypothetical protein | EYY08_11855 | Not Available | Negative | 2299481 - 2299867 | 14498.2 |
Pathways
867 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





