Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| incfii family plasmid replication initiator repa | EYY08_11165 | Not Available | Positive | 2174225 - 2175082 | 32801.7 |
| replication protein repa4 | EYY08_11175 | Not Available | Negative | 2175655 - 2175786 | 4809.99 |
| toxin-antitoxin system protein | EYY08_11180 | Not Available | Positive | 2176069 - 2176266 | 7658.97 |
| type ii toxin-antitoxin system rele/pare family toxin | EYY08_11185 | Not Available | Positive | 2176263 - 2176445 | 6931.48 |
| hypothetical protein | EYY08_11190 | Not Available | Positive | 2176544 - 2176852 | 11959.0 |
| hypothetical protein | EYY08_11195 | Not Available | Positive | 2177203 - 2177394 | 7319.65 |
| 3-deoxy-7-phosphoheptulonate synthase | EYY08_11200 | Not Available | Positive | 2177412 - 2178446 | 38227.2 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | EYY08_11205 | Not Available | Positive | 2178367 - 2178567 | 7846.68 |
| hypothetical protein | EYY08_11215 | Not Available | Negative | 2178776 - 2179003 | 8973.1 |
| siderophore salmochelin receptor iron | EYY08_11220 | Not Available | Positive | 2179300 - 2181477 | 79138.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





