Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | EYY08_10210 | Not Available | Negative | 1999922 - 2002366 | 89246.8 |
| d-sedoheptulose 7-phosphate isomerase | EYY08_10215 | Not Available | Positive | 2002606 - 2003184 | 20816.0 |
| class ii glutamine amidotransferase | EYY08_10220 | Not Available | Positive | 2003389 - 2004156 | 28681.2 |
| murein l,d-transpeptidase | EYY08_10225 | Not Available | Negative | 2004127 - 2004867 | 28080.8 |
| nlpc/p60 family protein | EYY08_10230 | Not Available | Positive | 2005179 - 2005928 | 28956.7 |
| flagellar type iii secretion system protein flha | EYY08_10235 | Not Available | Negative | 2006203 - 2007942 | 63307.3 |
| putative lateral flagellar export/assembly protein lafu | EYY08_10240 | Not Available | Positive | 2007902 - 2008672 | 28353.2 |
| dna polymerase iv | EYY08_10245 | Not Available | Positive | 2008743 - 2009798 | 39500.2 |
| gnat family n-acetyltransferase | EYY08_10250 | Not Available | Positive | 2009795 - 2010247 | 17482.1 |
| rna ligase rtcb family protein | EYY08_10255 | Not Available | Positive | 2010425 - 2011576 | 42130.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





