Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase dgcz | EYY08_10005 | Not Available | Negative | 1957245 - 1958135 | 33978.6 |
| ydei family stress tolerance ob fold protein | EYY08_10010 | Not Available | Negative | 1958390 - 1958782 | 14134.9 |
| peptidyl-dipeptidase dcp | EYY08_10015 | Not Available | Negative | 1959147 - 1961192 | 77564.8 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | EYY08_10020 | Not Available | Positive | 1961329 - 1962075 | 27280.6 |
| gntr family transcriptional regulator | EYY08_10025 | Not Available | Positive | 1962164 - 1962850 | 26589.7 |
| putative selenium delivery protein ydfz | EYY08_10030 | Not Available | Positive | 1963027 - 1963230 | 7276.83 |
| mannitol dehydrogenase family protein | EYY08_10035 | Not Available | Negative | 1963266 - 1964726 | 53761.4 |
| is1 family transposase | EYY08_10055 | Not Available | Positive | 1965928 - 1966023 | 3625.4 |
| autotransporter outer membrane beta-barrel domain-containing protein | EYY08_10060 | Not Available | Negative | 1966045 - 1969542 | 123641.0 |
| is66 family insertion sequence hypothetical protein | EYY08_10065 | Not Available | Positive | 1969991 - 1970395 | 15255.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





