Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | EYY08_09575 | Not Available | Negative | 1881339 - 1881950 | 22842.2 |
| imidazole glycerol phosphate synthase subunit hisf | EYY08_09580 | Not Available | Negative | 1881944 - 1882720 | 28498.1 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | EYY08_09585 | Not Available | Negative | 1882702 - 1883439 | 26046.2 |
| imidazole glycerol phosphate synthase subunit hish | EYY08_09590 | Not Available | Negative | 1883439 - 1884029 | 21569.0 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | EYY08_09595 | Not Available | Negative | 1884029 - 1885096 | 40277.3 |
| histidinol-phosphate transaminase | EYY08_09600 | Not Available | Negative | 1885096 - 1886166 | 39390.3 |
| histidinol dehydrogenase | EYY08_09605 | Not Available | Negative | 1886163 - 1887467 | 46259.0 |
| atp phosphoribosyltransferase | EYY08_09610 | Not Available | Negative | 1887473 - 1888372 | 33396.9 |
| his operon leader peptide | EYY08_09615 | Not Available | Negative | 1888518 - 1888568 | 2081.43 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | EYY08_09620 | Not Available | Positive | 1888851 - 1889102 | 9308.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





