Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase atos | EYY08_08610 | Not Available | Negative | 1658648 - 1660474 | 67784.1 |
| two-component system sensor histidine kinase rcsc | EYY08_08615 | Not Available | Positive | 1660641 - 1663490 | 106555.0 |
| transcriptional regulator rcsb | EYY08_08620 | Not Available | Negative | 1663690 - 1664340 | 23672.0 |
| phosphotransferase rcsd | EYY08_08625 | Not Available | Negative | 1664357 - 1667029 | 100382.0 |
| porin ompc | EYY08_08630 | Not Available | Positive | 1667769 - 1668896 | 41269.4 |
| fad:protein fmn transferase apbe | EYY08_08635 | Not Available | Positive | 1669008 - 1670063 | 38522.0 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | EYY08_08640 | Not Available | Positive | 1670137 - 1671201 | 39251.8 |
| dna oxidative demethylase alkb | EYY08_08645 | Not Available | Positive | 1671201 - 1671851 | 24076.9 |
| microcin j25 efflux abc transporter yoji | EYY08_08650 | Not Available | Positive | 1671927 - 1673570 | 61556.4 |
| malate dehydrogenase (quinone) | EYY08_08655 | Not Available | Positive | 1673788 - 1675434 | 60219.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





