Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | EYY08_08400 | Not Available | Positive | 1604945 - 1605703 | 27727.9 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | EYY08_08405 | Not Available | Positive | 1605718 - 1606575 | 31634.9 |
| o-succinylbenzoate synthase | EYY08_08410 | Not Available | Positive | 1606575 - 1607537 | 35402.4 |
| o-succinylbenzoate--coa ligase | EYY08_08415 | Not Available | Positive | 1607534 - 1608889 | 50277.5 |
| signal transduction protein pmrd | EYY08_08420 | Not Available | Positive | 1608999 - 1609265 | 9859.03 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | EYY08_08425 | Not Available | Negative | 1609259 - 1609645 | 14058.0 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | EYY08_08430 | Not Available | Negative | 1609645 - 1609980 | 12166.6 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | EYY08_08440 | Not Available | Negative | 1611629 - 1612519 | 33052.6 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | EYY08_08445 | Not Available | Negative | 1612516 - 1614498 | 74281.1 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | EYY08_08450 | Not Available | Negative | 1614498 - 1615466 | 36254.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





