Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin trxc | EYY08_06940 | Not Available | Negative | 1288859 - 1289278 | 15536.5 |
| trna/rrna methyltransferase | EYY08_06945 | Not Available | Positive | 1289485 - 1290522 | 37800.5 |
| uracil-dna glycosylase | EYY08_06950 | Not Available | Negative | 1290570 - 1291259 | 25723.7 |
| autonomous glycyl radical cofactor grca | EYY08_06955 | Not Available | Positive | 1291564 - 1291947 | 14269.0 |
| cysteine/o-acetylserine transporter | EYY08_06960 | Not Available | Negative | 1292002 - 1292589 | 21303.6 |
| lysr family transcriptional regulator | EYY08_06965 | Not Available | Positive | 1292692 - 1293573 | 33353.5 |
| atp-dependent rna helicase srmb | EYY08_06970 | Not Available | Negative | 1293606 - 1294940 | 49901.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | EYY08_06975 | Not Available | Positive | 1295072 - 1295809 | 27255.4 |
| l-aspartate oxidase | EYY08_06980 | Not Available | Negative | 1295794 - 1297416 | 60143.7 |
| rpoe leader peptide rsed | EYY08_06985 | Not Available | Positive | 1297672 - 1297827 | 6229.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





