Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail tube structural protein gp16 | EYY08_11810 | Not Available | Positive | 2290883 - 2291719 | 31336.4 |
| Tail fiber protein r | EYY08_11815 | Not Available | Positive | 2291798 - 2292232 | 15975.0 |
| Tail fibrer protein gps | EYY08_11820 | Not Available | Positive | 2292244 - 2295384 | 109383.0 |
| Tail fiber assembly protein | EYY08_11825 | Not Available | Positive | 2295387 - 2295920 | 20465.1 |
| Tail fiber assembly | EYY08_11830 | Not Available | Negative | 2295948 - 2296475 | 20455.0 |
| Tail protein | EYY08_11835 | Not Available | Negative | 2296480 - 2297331 | 29946.7 |
| Cin | EYY08_12300 | Not Available | Negative | 2393853 - 2394413 | 21199.8 |
| Hypothetical protein | EYY08_12305 | Not Available | Positive | 2394541 - 2394822 | 10626.1 |
| Lysis determining protein lyda | EYY08_12310 | Not Available | Positive | 2394890 - 2395219 | 11467.2 |
| Lysis determining protein lydb | EYY08_12315 | Not Available | Positive | 2395216 - 2395659 | 17169.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





