Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter substrate-binding protein znua | EYY08_06585 | Not Available | Negative | 1225367 - 1226299 | 33907.4 |
| zinc abc transporter atp-binding protein znuc | EYY08_06590 | Not Available | Positive | 1226378 - 1227133 | 27869.3 |
| zinc abc transporter permease subunit znub | EYY08_06595 | Not Available | Positive | 1227130 - 1227915 | 27792.5 |
| holliday junction branch migration dna helicase ruvb | EYY08_06600 | Not Available | Negative | 1228060 - 1229070 | 37176.0 |
| holliday junction branch migration protein ruva | EYY08_06605 | Not Available | Negative | 1229079 - 1229690 | 22087.0 |
| hypothetical protein | EYY08_06610 | Not Available | Negative | 1229829 - 1229894 | 2609.36 |
| yebb family permuted papain-like enzyme | EYY08_06615 | Not Available | Positive | 1229965 - 1230567 | 22707.2 |
| crossover junction endodeoxyribonuclease ruvc | EYY08_06620 | Not Available | Negative | 1230569 - 1231090 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | EYY08_06625 | Not Available | Negative | 1231125 - 1231865 | 26438.1 |
| dihydroneopterin triphosphate diphosphatase | EYY08_06630 | Not Available | Negative | 1231894 - 1232346 | 17292.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





