Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major capsid protein e | EYY08_05875 | Not Available | Negative | 1118030 - 1118412 | 13839.2 |
| hypothetical protein | EYY08_05880 | Not Available | Negative | 1118413 - 1118794 | 12612.1 |
| hypothetical protein | EYY08_05885 | Not Available | Negative | 1118885 - 1119175 | 9960.82 |
| duf1983 domain-containing protein | EYY08_05890 | Not Available | Negative | 1119176 - 1119545 | 13198.5 |
| duf1722 domain-containing protein | EYY08_05900 | Not Available | Positive | 1119806 - 1120315 | 20356.6 |
| deoxyribodipyrimidine photo-lyase | EYY08_05905 | Not Available | Positive | 1120312 - 1121730 | 53613.7 |
| dipeptide permease dtpd | EYY08_05910 | Not Available | Negative | 1121773 - 1123254 | 54160.1 |
| nif3-like dinuclear metal center hexameric protein | EYY08_05915 | Not Available | Positive | 1123525 - 1124268 | 26894.0 |
| 5-oxoprolinase subunit pxpb | EYY08_05920 | Not Available | Positive | 1124291 - 1124947 | 23948.0 |
| 5-oxoprolinase subunit pxpc | EYY08_05925 | Not Available | Positive | 1124941 - 1125873 | 34448.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





