Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytosine(1962)-c(5))-methyltransferase rlmi | EYY08_05565 | Not Available | Negative | 1059698 - 1060888 | 44398.6 |
| acylphosphatase | EYY08_05570 | Not Available | Positive | 1060983 - 1061261 | 10258.3 |
| sulfurtransferase tuse | EYY08_05575 | Not Available | Negative | 1061258 - 1061587 | 12395.0 |
| ftsh protease modulator ycca | EYY08_05580 | Not Available | Negative | 1061679 - 1062338 | 23364.3 |
| Trna-ser | Not Available | Not Available | Positive | 1062545 - 1062632 | Not Available |
| hydrogenase 1 small subunit | EYY08_05590 | Not Available | Positive | 1063059 - 1064177 | 40683.6 |
| ni/fe-hydrogenase large subunit | EYY08_05595 | Not Available | Positive | 1064174 - 1065967 | 66271.1 |
| ni/fe-hydrogenase b-type cytochrome subunit | EYY08_05600 | Not Available | Positive | 1065986 - 1066693 | 27598.8 |
| hydrogenase 1 maturation protease | EYY08_05605 | Not Available | Positive | 1066690 - 1067277 | 21544.8 |
| hydrogenase-1 operon protein hyae | EYY08_05610 | Not Available | Positive | 1067274 - 1067672 | 14878.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





