Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-n-hydroxylaminopurine resistance protein ycbx | EYY08_05465 | Not Available | Negative | 1037410 - 1038519 | 40577.5 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | EYY08_05470 | Not Available | Positive | 1038763 - 1040871 | 78828.5 |
| abc transporter atp-binding protein | EYY08_05475 | Not Available | Positive | 1040883 - 1042790 | 72110.2 |
| membrane integrity-associated transporter subunit pqia | EYY08_05480 | Not Available | Positive | 1042920 - 1044173 | 46466.2 |
| intermembrane transport protein pqib | EYY08_05485 | Not Available | Positive | 1044178 - 1045818 | 60497.0 |
| membrane integrity-associated transporter subunit pqic | EYY08_05490 | Not Available | Positive | 1045815 - 1046378 | 20635.5 |
| ribosome modulation factor | EYY08_05495 | Not Available | Positive | 1046634 - 1046801 | 6507.88 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | EYY08_05500 | Not Available | Negative | 1046871 - 1047389 | 18970.2 |
| lon protease family protein | EYY08_05505 | Not Available | Negative | 1047458 - 1049218 | 65736.3 |
| macrodomain ter protein matp | EYY08_05510 | Not Available | Positive | 1049404 - 1049856 | 17694.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





