Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | EYY08_04035 | Not Available | Negative | 770884 - 774027 | 114746.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | EYY08_04040 | Not Available | Negative | 774039 - 775262 | 44455.5 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | EYY08_04045 | Not Available | Negative | 775278 - 775610 | 12326.0 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | EYY08_04050 | Not Available | Negative | 775634 - 777016 | 50812.0 |
| copper response regulator transcription factor cusr | EYY08_04055 | Not Available | Positive | 777173 - 777856 | 25396.1 |
| cu(+)/ag(+) sensor histidine kinase cuss | EYY08_04060 | Not Available | Positive | 777846 - 779288 | 53761.2 |
| phage adsorption protein nrfb | EYY08_04065 | Not Available | Positive | 779438 - 781675 | 85376.4 |
| duf4434 family protein | EYY08_04075 | Not Available | Positive | 784635 - 785525 | 33040.5 |
| host specificity protein j | EYY08_04080 | Not Available | Negative | 786237 - 786840 | 22379.2 |
| phage portal protein | EYY08_04085 | Not Available | Negative | 786841 - 787434 | 22235.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





