Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf987 domain-containing protein | EYY08_03410 | Not Available | Negative | 659149 - 659370 | 8309.11 |
| dna repair protein radc | EYY08_03415 | Not Available | Negative | 659439 - 659689 | 8987.9 |
| hd family hydrolase | EYY08_03420 | Not Available | Negative | 659690 - 659765 | 3040.58 |
| duf2303 family protein | EYY08_03425 | Not Available | Negative | 659893 - 660430 | 19831.6 |
| head decoration protein | EYY08_03430 | Not Available | Positive | 660500 - 660832 | 11555.5 |
| hypothetical protein | EYY08_03435 | Not Available | Positive | 660889 - 661124 | 8838.7 |
| duf1983 domain-containing protein | EYY08_03440 | Not Available | Negative | 661125 - 661795 | 24358.7 |
| is200/is605 family transposase | EYY08_03455 | Not Available | Positive | 663228 - 663686 | 18028.0 |
| s49 family peptidase | EYY08_03460 | Not Available | Negative | 663759 - 664332 | 19450.6 |
| prophage lysis lipoprotein rzod | EYY08_03465 | Not Available | Negative | 664333 - 664502 | 6289.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





