Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent87 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1322908 bp
Thymine Count
1318934 bp
Guanine Count
1337981 bp
Cytosine Count
1355631 bp
Genome Length
5335599 bp
Protein-coding Genes
4745 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ncs2 family permease | EYY07_26775 | Not Available | Negative | 5248280 - 5249629 | 45762.5 |
| redox-sensitive transcriptional activator soxr | EYY07_26780 | Not Available | Negative | 5250176 - 5250640 | 17249.9 |
| superoxide response transcriptional regulator soxs | EYY07_26785 | Not Available | Positive | 5250726 - 5251049 | 12911.6 |
| c-di-gmp phosphodiesterase pdec | EYY07_26790 | Not Available | Negative | 5251052 - 5252638 | 60643.4 |
| hypothetical protein | EYY07_26795 | Not Available | Positive | 5253067 - 5253348 | 10302.0 |
| single-stranded dna-binding protein ssb1 | EYY07_26800 | Not Available | Negative | 5253447 - 5253983 | 18976.1 |
| excinuclease abc subunit uvra | EYY07_26805 | Not Available | Positive | 5254237 - 5257059 | 103890.0 |
| mmcq/yjbr family dna-binding protein | EYY07_26810 | Not Available | Negative | 5257094 - 5257450 | 13520.2 |
| yjbq family protein | EYY07_26815 | Not Available | Negative | 5257454 - 5257870 | 15626.7 |
| acid phosphatase apha | EYY07_26820 | Not Available | Negative | 5257981 - 5258694 | 26076.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





