Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent87 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1322908 bp
Thymine Count
1318934 bp
Guanine Count
1337981 bp
Cytosine Count
1355631 bp
Genome Length
5335599 bp
Protein-coding Genes
4745 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crossover junction endodeoxyribonuclease | EYY07_25400 | Not Available | Positive | 4954107 - 4954236 | 4604.64 |
| transposase | EYY07_25405 | Not Available | Negative | 4954237 - 4954616 | 14428.5 |
| is21-like element is100 family transposase | EYY07_25410 | Not Available | Negative | 4954613 - 4955635 | 39815.1 |
| phage tail tape measure protein | EYY07_25415 | Not Available | Negative | 4955722 - 4957098 | 49545.4 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | EYY07_25420 | Not Available | Negative | 4957250 - 4957822 | 21146.2 |
| methionine abc transporter atp-binding protein metn | EYY07_25425 | Not Available | Positive | 4958010 - 4959041 | 37804.7 |
| methionine abc transporter permease meti | EYY07_25430 | Not Available | Positive | 4959034 - 4959687 | 23253.6 |
| methionine abc transporter substrate-binding lipoprotein metq | EYY07_25435 | Not Available | Positive | 4959727 - 4960542 | 29433.3 |
| rcs stress response system protein rcsf | EYY07_25440 | Not Available | Positive | 4960660 - 4961064 | 14164.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | EYY07_25445 | Not Available | Positive | 4961061 - 4961768 | 26379.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





