Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent87 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1322908 bp
Thymine Count
1318934 bp
Guanine Count
1337981 bp
Cytosine Count
1355631 bp
Genome Length
5335599 bp
Protein-coding Genes
4745 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine transporter tdcc | EYY07_25020 | Not Available | Positive | 4882296 - 4883627 | 48895.8 |
| propionate kinase | EYY07_25025 | Not Available | Positive | 4883653 - 4884861 | 43423.7 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | EYY07_25030 | Not Available | Positive | 4884895 - 4887189 | 86036.6 |
| enamine/imine deaminase | EYY07_25035 | Not Available | Positive | 4887203 - 4887592 | 14008.0 |
| l-serine ammonia-lyase | EYY07_25040 | Not Available | Positive | 4887664 - 4889028 | 48534.6 |
| haaap family serine/threonine permease | EYY07_25045 | Not Available | Positive | 4889303 - 4890634 | 48299.6 |
| serine dehydratase subunit alpha family protein | EYY07_25050 | Not Available | Positive | 4890662 - 4891972 | 45336.8 |
| hypothetical protein | EYY07_25055 | Not Available | Negative | 4892104 - 4892268 | 5935.07 |
| pirin family protein | EYY07_25060 | Not Available | Negative | 4892291 - 4892992 | 25930.9 |
| lysr family transcriptional regulator | EYY07_25065 | Not Available | Positive | 4893097 - 4893993 | 33231.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





