Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent87 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1322908 bp
Thymine Count
1318934 bp
Guanine Count
1337981 bp
Cytosine Count
1355631 bp
Genome Length
5335599 bp
Protein-coding Genes
4745 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel import atp-binding protein nike | EYY07_21785 | Not Available | Negative | 4259804 - 4260610 | 29696.4 |
| nickel import atp-binding protein nikd | EYY07_21790 | Not Available | Negative | 4260607 - 4261371 | 26814.1 |
| nickel abc transporter permease subunit nikc | EYY07_21795 | Not Available | Negative | 4261371 - 4262204 | 30391.9 |
| nickel abc transporter permease subunit nikb | EYY07_21800 | Not Available | Negative | 4262201 - 4263145 | 35165.2 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | EYY07_21805 | Not Available | Negative | 4263145 - 4264719 | 58824.2 |
| 4'-phosphopantetheinyl transferase acpt | EYY07_21810 | Not Available | Negative | 4264830 - 4265417 | 21715.8 |
| ai-2e family transporter | EYY07_21815 | Not Available | Negative | 4265472 - 4266521 | 38562.8 |
| mfs transporter | EYY07_21820 | Not Available | Positive | 4266620 - 4267870 | 43458.1 |
| phage sensitivity protein dcrb | EYY07_21825 | Not Available | Negative | 4267874 - 4268431 | 19787.7 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | EYY07_21830 | Not Available | Negative | 4268504 - 4269169 | 25285.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





