Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent87 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1322908 bp
Thymine Count
1318934 bp
Guanine Count
1337981 bp
Cytosine Count
1355631 bp
Genome Length
5335599 bp
Protein-coding Genes
4745 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication regulatory protein repa | EYY07_21455 | Not Available | Positive | 4197422 - 4197679 | 9595.37 |
| replication protein repa | EYY07_21460 | Not Available | Negative | 4197701 - 4197832 | 4818.73 |
| repa leader peptide tap | EYY07_21465 | Not Available | Positive | 4197911 - 4197985 | 2588.29 |
| hypothetical protein | EYY07_21470 | Not Available | Positive | 4197966 - 4198460 | 18191.9 |
| incfii family plasmid replication initiator repa | EYY07_21475 | Not Available | Positive | 4198453 - 4199310 | 32700.6 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | EYY07_21480 | Not Available | Positive | 4200273 - 4200524 | 9211.91 |
| type ii toxin-antitoxin system rele/pare family toxin | EYY07_21485 | Not Available | Positive | 4200521 - 4200808 | 11105.8 |
| is1 family transposase | EYY07_21495 | Not Available | Negative | 4201248 - 4201527 | 10970.5 |
| cobalamin biosynthesis protein cobw | EYY07_21500 | Not Available | Positive | 4202080 - 4203273 | 44780.0 |
| hypothetical protein | EYY07_21515 | Not Available | Positive | 4205338 - 4205526 | 7073.42 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





