Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent87 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1322908 bp
Thymine Count
1318934 bp
Guanine Count
1337981 bp
Cytosine Count
1355631 bp
Genome Length
5335599 bp
Protein-coding Genes
4745 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | EYY07_21395 | Not Available | Negative | 4186612 - 4187037 | 15986.8 |
| type vi secretion system contractile sheath large subunit | EYY07_21400 | Not Available | Negative | 4187042 - 4188526 | 55658.9 |
| type vi secretion system contractile sheath small subunit | EYY07_21405 | Not Available | Negative | 4188549 - 4189052 | 18438.2 |
| hcp family type vi secretion system effector | EYY07_21410 | Not Available | Positive | 4189766 - 4190284 | 19191.7 |
| hypothetical protein | EYY07_21415 | Not Available | Positive | 4190505 - 4190685 | 6775.14 |
| phospholipase | EYY07_21420 | Not Available | Positive | 4190787 - 4191248 | 17684.9 |
| phosphoethanolamine transferase | EYY07_21425 | Not Available | Negative | 4191357 - 4192856 | 55861.4 |
| porin family protein | EYY07_21430 | Not Available | Negative | 4193038 - 4193778 | 27146.0 |
| hypothetical protein | EYY07_21445 | Not Available | Negative | 4196724 - 4196933 | 7374.69 |
| type i toxin-antitoxin system hok family toxin | EYY07_21450 | Not Available | Positive | 4196989 - 4197138 | 5543.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





