Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent87 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1322908 bp
Thymine Count
1318934 bp
Guanine Count
1337981 bp
Cytosine Count
1355631 bp
Genome Length
5335599 bp
Protein-coding Genes
4745 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysis protein | EYY07_21280 | Not Available | Positive | 4172210 - 4172353 | 4908.06 |
| hypothetical protein | EYY07_21285 | Not Available | Positive | 4172460 - 4172651 | 7332.74 |
| plasmid replication protein | EYY07_21290 | Not Available | Positive | 4172850 - 4173743 | 33616.1 |
| hypothetical protein | EYY07_21295 | Not Available | Negative | 4173714 - 4173938 | 8265.12 |
| mobilization protein | EYY07_21300 | Not Available | Negative | 4173969 - 4174235 | 10070.5 |
| conjugal transfer protein | EYY07_21305 | Not Available | Positive | 4174423 - 4176642 | 84392.4 |
| colicin | EYY07_21310 | Not Available | Positive | 4176874 - 4178514 | 57801.8 |
| cloacin | EYY07_21315 | Not Available | Positive | 4178524 - 4178670 | 5502.41 |
| is3 family transposase | EYY07_21320 | Not Available | Negative | 4178671 - 4178818 | 5641.19 |
| serine-type d-ala-d-ala carboxypeptidase dacd | EYY07_21325 | Not Available | Positive | 4178847 - 4180010 | 43051.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





