Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent87 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1322908 bp
Thymine Count
1318934 bp
Guanine Count
1337981 bp
Cytosine Count
1355631 bp
Genome Length
5335599 bp
Protein-coding Genes
4745 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system antitoxin ccda | EYY07_16790 | Not Available | Positive | 3305854 - 3306072 | 8354.72 |
| type ii toxin-antitoxin system toxin ccdb | EYY07_16795 | Not Available | Positive | 3306074 - 3306379 | 11693.2 |
| phage integrase family protein | EYY07_16800 | Not Available | Positive | 3306380 - 3307186 | 29682.3 |
| replication initiation protein | EYY07_16805 | Not Available | Negative | 3307866 - 3308567 | 26578.0 |
| para family protein | EYY07_16810 | Not Available | Positive | 3309219 - 3310424 | 44868.8 |
| parb/repb/spo0j family partition protein | EYY07_16815 | Not Available | Positive | 3310421 - 3311392 | 36569.9 |
| site-specific integrase | EYY07_16830 | Not Available | Positive | 3312737 - 3313735 | 37614.4 |
| hypothetical protein | EYY07_16835 | Not Available | Positive | 3313732 - 3314643 | 34912.1 |
| integrase | EYY07_16840 | Not Available | Positive | 3314720 - 3315943 | 46674.3 |
| hypothetical protein | EYY07_16845 | Not Available | Negative | 3316000 - 3316069 | 2656.18 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





