Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent87 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1322908 bp
Thymine Count
1318934 bp
Guanine Count
1337981 bp
Cytosine Count
1355631 bp
Genome Length
5335599 bp
Protein-coding Genes
4745 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colibactin polyketide synthase clbc | EYY07_13115 | Not Available | Negative | 2582137 - 2584737 | 94649.4 |
| colibactin hybrid non-ribosomal peptide synthetase/type i polyketide synthase clbb | EYY07_13120 | Not Available | Negative | 2584778 - 2594398 | 352544.0 |
| hypothetical protein | EYY07_13125 | Not Available | Positive | 2594437 - 2594625 | 7441.23 |
| colibactin biosynthesis luxr family transcriptional regulator clbr | EYY07_13130 | Not Available | Positive | 2594792 - 2595004 | 8259.03 |
| colibactin biosynthesis phosphopantetheinyl transferase clba | EYY07_13135 | Not Available | Positive | 2595005 - 2595739 | 28673.5 |
| hypothetical protein | EYY07_13150 | Not Available | Negative | 2597042 - 2597440 | 15072.0 |
| l,d-transpeptidase | EYY07_13155 | Not Available | Negative | 2597759 - 2598694 | 34447.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | EYY07_13160 | Not Available | Negative | 2598756 - 2599835 | 36862.2 |
| adenosylcobinamide-gdp ribazoletransferase | EYY07_13165 | Not Available | Negative | 2599847 - 2600590 | 26431.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | EYY07_13170 | Not Available | Negative | 2600587 - 2601132 | 20195.2 |
Pathways
881 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





