Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent85 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1320509 bp
Thymine Count
1322304 bp
Guanine Count
1341823 bp
Cytosine Count
1352224 bp
Genome Length
5337005 bp
Protein-coding Genes
4774 genes
Non-Coding Genes
425 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ypjd | EYY05_15755 | Not Available | Positive | 3158166 - 3158957 | 29263.9 |
| duf21 domain-containing protein | EYY05_15760 | Not Available | Positive | 3158978 - 3160264 | 48047.2 |
| nucleotide exchange factor grpe | EYY05_15765 | Not Available | Negative | 3160319 - 3160912 | 21857.1 |
| nad(+) kinase | EYY05_15770 | Not Available | Positive | 3161035 - 3161913 | 32583.3 |
| dna repair protein recn | EYY05_15775 | Not Available | Positive | 3161999 - 3163660 | 61398.0 |
| outer membrane protein assembly factor bame | EYY05_15780 | Not Available | Positive | 3163809 - 3164150 | 12302.8 |
| rnfh family protein | EYY05_15785 | Not Available | Negative | 3164212 - 3164502 | 10816.1 |
| type ii toxin-antitoxin system toxin rata | EYY05_15790 | Not Available | Negative | 3164492 - 3164968 | 17686.6 |
| ssra-binding protein smpb | EYY05_15795 | Not Available | Positive | 3165100 - 3165582 | 18270.1 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 3165797 - 3166159 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





