Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent85 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1320509 bp
Thymine Count
1322304 bp
Guanine Count
1341823 bp
Cytosine Count
1352224 bp
Genome Length
5337005 bp
Protein-coding Genes
4774 genes
Non-Coding Genes
425 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c maturation protein ccme | EYY05_14400 | Not Available | Positive | 2873093 - 2873572 | 17699.4 |
| heme lyase ccmf/nrfe family subunit | EYY05_14405 | Not Available | Positive | 2873569 - 2875512 | 71392.5 |
| thiol:disulfide interchange protein dsbe | EYY05_14410 | Not Available | Positive | 2875509 - 2876066 | 20810.1 |
| cytochrome c-type biogenesis protein ccmh | EYY05_14415 | Not Available | Positive | 2876063 - 2877115 | 39107.3 |
| nitrate/nitrite response regulator protein narp | EYY05_14420 | Not Available | Negative | 2877150 - 2877797 | 23626.5 |
| hypothetical protein | EYY05_14425 | Not Available | Positive | 2878117 - 2878320 | 6988.32 |
| autotransporter outer membrane beta-barrel domain-containing protein | EYY05_14430 | Not Available | Positive | 2878429 - 2878914 | 17012.7 |
| Trna-pro | Not Available | Not Available | Positive | 2879016 - 2879092 | Not Available |
| cardiolipin transport protein pbga | EYY05_14440 | Not Available | Negative | 2879167 - 2880927 | 67299.8 |
| duf1414 domain-containing protein | EYY05_14445 | Not Available | Negative | 2880947 - 2881174 | 8302.98 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





