Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent85 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1320509 bp
Thymine Count
1322304 bp
Guanine Count
1341823 bp
Cytosine Count
1352224 bp
Genome Length
5337005 bp
Protein-coding Genes
4774 genes
Non-Coding Genes
425 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate transporter pgtp | EYY05_13335 | Not Available | Positive | 2660813 - 2662177 | 50182.5 |
| hypothetical protein | EYY05_13340 | Not Available | Positive | 2662208 - 2662585 | 14784.7 |
| inovirus gp2 family protein | EYY05_13350 | Not Available | Positive | 2664174 - 2664740 | 22465.8 |
| hypothetical protein | EYY05_13355 | Not Available | Positive | 2664998 - 2665573 | 21870.9 |
| alpa family transcriptional regulator | EYY05_13360 | Not Available | Positive | 2665642 - 2665878 | 9067.83 |
| pilus assembly protein | EYY05_13365 | Not Available | Negative | 2666221 - 2666454 | 8734.52 |
| hypothetical protein | EYY05_13370 | Not Available | Positive | 2666690 - 2666872 | 6791.36 |
| major pilus subunit operon regulatory protein papb | EYY05_13375 | Not Available | Positive | 2666859 - 2667173 | 11696.2 |
| type 1 fimbrial protein | EYY05_13380 | Not Available | Positive | 2667359 - 2667928 | 19412.1 |
| type 1 fimbrial protein | EYY05_13385 | Not Available | Positive | 2668018 - 2668578 | 20858.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





