Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent85 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1320509 bp
Thymine Count
1322304 bp
Guanine Count
1341823 bp
Cytosine Count
1352224 bp
Genome Length
5337005 bp
Protein-coding Genes
4774 genes
Non-Coding Genes
425 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gsph | EYY05_12935 | Not Available | Positive | 2569474 - 2569983 | 18484.0 |
| type ii secretion system protein gspi | EYY05_12940 | Not Available | Positive | 2569980 - 2570357 | 13927.2 |
| type ii secretion system protein gspj | EYY05_12945 | Not Available | Positive | 2570350 - 2570937 | 22246.6 |
| general secretion pathway protein gspk | EYY05_12950 | Not Available | Positive | 2570930 - 2571913 | 37468.5 |
| type ii secretion system protein gspl | EYY05_12955 | Not Available | Positive | 2571928 - 2573091 | 44622.3 |
| type ii secretion system protein m | EYY05_12960 | Not Available | Positive | 2573088 - 2573549 | 17299.8 |
| prepilin peptidase | EYY05_12965 | Not Available | Positive | 2573549 - 2574226 | 24872.1 |
| bacterioferritin | EYY05_12970 | Not Available | Negative | 2574255 - 2574731 | 18496.2 |
| bacterioferritin-associated ferredoxin | EYY05_12975 | Not Available | Negative | 2574803 - 2574997 | 7363.04 |
| bifunctional chitinase/lysozyme | EYY05_12980 | Not Available | Negative | 2575166 - 2577868 | 97492.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





