Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent85 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1320509 bp
Thymine Count
1322304 bp
Guanine Count
1341823 bp
Cytosine Count
1352224 bp
Genome Length
5337005 bp
Protein-coding Genes
4774 genes
Non-Coding Genes
425 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comec family protein | EYY05_08035 | Not Available | Negative | 1551446 - 1553710 | 84481.1 |
| integration host factor subunit beta | EYY05_08040 | Not Available | Negative | 1553916 - 1554200 | 10651.8 |
| 30s ribosomal protein s1 | EYY05_08045 | Not Available | Negative | 1554360 - 1556033 | 61161.5 |
| (d)cmp kinase | EYY05_08050 | Not Available | Negative | 1556144 - 1556827 | 24747.8 |
| metalloprotease | EYY05_08055 | Not Available | Negative | 1557000 - 1557764 | 26778.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EYY05_08060 | Not Available | Negative | 1557934 - 1559217 | 46224.6 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EYY05_08065 | Not Available | Negative | 1559288 - 1560376 | 39774.4 |
| duf421 domain-containing protein | EYY05_08070 | Not Available | Negative | 1560575 - 1561267 | 26251.4 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | EYY05_08075 | Not Available | Positive | 1561397 - 1563157 | 65714.0 |
| formate transporter foca | EYY05_08080 | Not Available | Positive | 1563563 - 1564420 | 30992.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





